In silico restriction map and PFGE


Genome: Mycoplasma pneumoniae 309
Length of genome: 817176 bp
Restriction Enzyme: PspXI
Recognition sequence: VC'TCGA_GB
Number of Cleaves: 20

Simulate PFGE for all Mycoplasma
info



Cleavage PositionLength of sequenceLength of sequence (sorted)PFGE
68086
90687
116686
117048
210107
214019
221676
289307
294039
329491
349033
367168
478451
522478
565202
581528
646207
668628
747164
817173
68089
22601
25999
362
93059
3912
7657
67631
4732
35452
19542
18135
111283
44027
42724
16326
64679
22421
78536
70009

111283
93059
78536
70009
68089
67631
64679
44027
42724
35452
25999
22601
22421
19542
18135
16326
7657
4732
3912
362
































All data are shown as number of nucleotides.